Plot PCA results

Usage

# S3 method for class 'stat_pca'
plot(
  x,
  type = c("scores", "scree", "loadings"),
  pcs = c(1, 2),
  extent = 1,
  morphospace = "grid",
  color = NULL,
  labels = NULL,
  chull = TRUE,
  n_pcs = NULL,
  cex = 0.7,
  legend = TRUE,
  ...
)

Arguments

x: A stat_pca object
type: Character. Type of plot
pcs: Integer vector of length 2. Which PCs to plot
extent: Numeric. Plot extent factor (< 1 = zoom in, > 1 = zoom out)
morphospace: Character or FALSE. Morphospace type: "grid", "range", "axes", "centroids", FALSE
color: Column name for coloring points
labels: Column name for text labels
chull: Logical. Draw convex hulls?
n_pcs: Integer. For scree plot
cex: Numeric. Character expansion
legend: Logical. Show legend?
...: Passed to morphospace functions (n, nrow, ncol, template, lwd, col)